MS Tools

H/D Exchange Calculator: Calculates number of exchangeable hydrogens, monoisotopic and average masses and displays a simple peptide statistics (example result)
H/D Experiment Planner: Creates a time schedule for H/D exchange experiments (example result)
Draw Map: Creates a graphical representation of protein sequence coverage (example result)
Draw H/D Heat Map: Draws graphical representation of H/D exchange using color gradients (heat maps) (example result)
Draw H/D Protection Plot: Creates a protection plot based on data from H/D exchange and allows comparison of various conditions (example result)
JMol Scripter: Visualization of H/D data on protein structure using JMol.
Draw H/D Exchange plots: Draws graphical representation of H/D exchange using plots

H/D related sites worth visiting

Software from our laboratory

A novel approach of high-accuracy FTICR-MS data utilization in protein quantiﬁcation experiments.

Program mMass presents an open source multi-platform package of simple tools for mass spectrometric data analysis. It consist of several modules and tools for protein sequence handling and mass spectrum interpretation with focus on common proteomic tasks.

If you have any questions, please do not hesitate to contact Martin Strohalm.