Introduction

Prezentace Škola MS 2022

New paper: Eur. J. Mass Spectrom. (2023), 29(2):102-110. DOI: 10.1177/14690667231164766.

New tool - MassSpecBlocks: J. Cheminformatics (2021), 13(1):51. DOI: 10.1186/s13321-021-00530-2, Homepage, Tutorial.

CycloBranch

(v. 2.1.35)

Availability & Usability	Dereplication & Compound Search (MS, LC-MS, and MSI)	De Novo Sequencing & Database Search (MS/MS)
Open-Source Graphical User Interface User-Friendly Cross-Platform Stand-Alone	MALDI-MS LC-MS MALDI-MSI DESI-MSI Simulate Isotopic Pattern Calculate Molecular Formula	Linear Peptides Cyclic Peptides Branch-Cyclic Peptides Siderophores Polyketides
Supported File Formats	Databases	Visualization
XML-based: mzML, mzXML, imzML Native: baf (Bruker), raw (Thermo), raw (Waters) Plain Text: mgf, txt	Building Blocks (MS/MS) Sequences (MS/MS) Compounds (MS, LC-MS and MSI) Custom	Mass Spectra (MS, MSI, and MS/MS) Draw Peptide Tool (MS/MS) Chromatogram (LC-MS) Image Fusion (MSI, histology and microscopy images)

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If you use CycloBranch in your work, please cite us using

• Anal. Chem. (2020), 92(10):6844-6849. DOI: 10.1021/acs.analchem.0c00170
  Download citation: [ ris ], [ bib ]

or another related reference.