Introduction

CycloBranch

(v. 1.3.1)

Availability & Usability	Compound Search (MS and MSI)	De Novo Sequencing & Database Search (MS/MS)
Open-source Graphical user interface User-friendly Cross-platform Stand-alone	MALDI-MS LC-MS MALDI-MSI DESI-MSI	Ribosomal peptides Nonribosomal peptides Siderophores Polyketides
Supported File Formats	Databases	Visualization
XML-based: mzML, mzXML, imzML Native: baf (Bruker), raw (Thermo), raw (Waters) Plain text: mgf, txt	Building blocks (MS/MS) Sequences (MS/MS) Compounds (MS and MSI) Custom	Mass Spectra (MS, MSI, and MS/MS) Draw Peptide Tool (MS/MS) Chromatogram (LC-MS) Image Fusion (MSI, histology images, and SEM)

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Any work based on CycloBranch shall cite any of the following references:

• J. Am. Soc. Mass Spectrom. (2015), 26(10):1780-1786. DOI: 10.1007/s13361-015-1211-1
• BBA - Proteins Proteom. (2017), 1865(7):768-775. DOI: 10.1016/j.bbapap.2016.12.003