CycloBranch
cBricksDatabase Member List

This is the complete list of members for cBricksDatabase, including all inherited members.

calculateSummaryFromComposition(int brickid)cBricksDatabase
cBricksDatabase()cBricksDatabase
checkKetideBlocks(cBrick &brickseries, bool regularblocksorder)cBricksDatabase
clear()cBricksDatabase
getAcronymName(string &composition, bool useHTMLReferences)cBricksDatabase
getAcronymNameOfTPeptide(const string &tcomposition, bool useHTMLReferences)cBricksDatabase
getMapOfNeutralLosses(vector< int > &lossids, map< string, int > &summarymap)cBricksDatabase
getMassOfComposition(vector< int > &combarray, int numberofbasicbricks)cBricksDatabase
getMassOfNeutralLosses(vector< int > &lossids)cBricksDatabase
getRealName(string &composition)cBricksDatabase
getSummaryFormulaOfNeutralLosses(vector< int > &lossids)cBricksDatabase
getTagName(string &composition)cBricksDatabase
getTagNameOfTPeptide(string &tcomposition)cBricksDatabase
load(ifstream &is)cBricksDatabase
loadFromPlainTextStream(ifstream &stream, string &errormessage, bool ignoreerrors, bool skiph2blocks)cBricksDatabase
nextCombination(vector< int > &combarray, int numberofbasicbricks, int maximumbricksincombination, double maximumcumulativemass, double neutralprecursormass)cBricksDatabase
nextCombinationFast(vector< int > &combarray, vector< int > &combcounts, vector< double > &combmasses, double &mass, int numberofbasicbricks, int maximumbricksincombination, double maximumcumulativemass, double neutralprecursormass)cBricksDatabase
nextCombinationFastLimited(vector< int > &combarray, vector< int > &combcounts, vector< int > &comblimits, vector< double > &combmasses, double &mass, int numberofbasicbricks, int maximumbricksincombination, double maximumcumulativemass, double neutralprecursormass)cBricksDatabase
operator[](int position)cBricksDatabase
print()cBricksDatabase
push_back(cBrick &brick)cBricksDatabase
removeLastBrick()cBricksDatabase
replaceAcronymsByIDs(string &sequence, string &errormessage)cBricksDatabase
size()cBricksDatabase
sortbyMass()cBricksDatabase
store(ofstream &os)cBricksDatabase
storeToPlainTextStream(ofstream &stream)cBricksDatabase