Class Hierarchy

This inheritance list is sorted roughly, but not completely, alphabetically:

[detail level 12]

CcBrick	The class representing a building block (brick)
CcBricksDatabase	The class representing a database of building blocks (bricks)
CcCandidate	The class representing a peptide sequence candidate
CcCoordinateInfo	Store aggregated information about a coordinate
CcDefaultNeutralLosses	The class representing a vector of default neutral losses
CcDeNovoGraph	The class implementing the de novo graph
CcDeNovoGraphNode	The class representing a node in the de novo graph
CcEdge	The structure representing an outgoing edge from a node
CcEnvelopeSummaryTableKeyMS_comp	Comparison object for cSummaryTableKeyMS (whole envelope)
CcFormulaPredictorRowItem	An auxiliary structure representing a row in the output table
CcFragmentIons	The detailed definitions of all supported fragment ion types
CcFragmentIonType	The struct for definition of a fragment ion type
CcGlobalPreferences	The class storing global preferences
CcImzML	ImzML parser
CcImzMLItem	A parsed imzML item
CcIonLabel	Auxiliary structure for visualization of labels of fragment ions
CcIonSummaryTableKeyMS_comp	Comparison object for cSummaryTableKeyMS (independent ions)
CcIonType	The struct for definition of a ion type
CcIsotopeMap	The class representing an isotope map
CcLifMetadata	A structure to keep parsed lif metadata
CcMzML	MzML parser
CcompareStringBySize	Compare items in a string vector by size
CcParameters	The class storing parameters of the application
CcPeak	A structure representing a peak in a mass spectrum
CcPeakListSeries	The class representing a series of peaklists
CcPeaksList	The class representing a peak list
CcPeriodicTableMap	The class representing a periodic table
CcPubchemCIDReader	The functor used to get the CIDs of compounds with the same formula
CcPubchemNameReader	The functor used to get the names of compounds from CID
CcRowItemInfo	An auxiliary row info structure
CcSequence	The class representing a sequence
CcSequenceDatabase	The class representing a database of sequences
CcSummaryFormula	The representation of a summary formula
CcSummaryTableKeyMS	Key to reduce the summary table when exporting statistics for MS and MSI data
CcSummaryTableKeyMSMS	Key to reduce the summary table when exporting statistics for MS/MS data
CcSummaryTableKeyMSMS_comp	Comparison object for cSummaryTableKeyMSMS
CcTablePosition	Position in QTableWidget
CcTheoreticalSpectrum	The class representing a theoretical mass spectrum
CcTheoreticalSpectrumList	The class representing lists of theoretical spectra
CcTileInfo	Description of an image tile
Chash_cCandidate	The structure defining a hash function of cCandidate
Chash_cEdge	The structure defining a hash function of cEdge
Chash_cIonLabel	The structure defining a hash function of cIonLabel
ChintStructure	An auxiliary structure for search hints
Cisotope	Representation of an isotope
ClayerInfo	Paramaters of a layer
CmatchedSeries	An auxiliary structure for visualisation of matched series of fragment ions
CmicroscopyLayerInfo	Paramaters of a microscopy layer
CneutralLoss	The structure for a detailed definition of a neutral loss
CnodeEdge	An auxiliary structure to store relationship between a node and an edge
►CQDialog
CcExportDialog	The implementation of a dialog to export spectrum/peptide image
CcFindDialog	The implementation of a find dialog
CcHTMLExportDialog	The implementation of HTML export dialog
CcImageWindowImportDialog	Import dialog in image window
CcPreferencesDialog	Preferences dialog
CcPreferencesIonTypeDialog	Preferences dialog
►CQGraphicsView
CcCalibrationChartScene	The implementation of an isotopic pattern simulator (graphics)
CcChromatogramWindowWidget	Chromatogram window widget
CcImageWindowWidget	Image window widget
CcPatternSimulatorSceneWidget	The implementation of an isotopic pattern simulator (graphics)
CcSpectrumSceneWidget	The widget representing a 2D mass spectrum
►CQMainWindow
CcBricksDatabaseWidget	An editor of building blocks database
CcCalibrationChart	Calibration chart
CcChromatogramWindow	Chromatogram window
CcFormulaPredictor	Predicts the molecular formula from the exact mass
CcImageWindow	Image window
CcMainWindow	The class representing the main window of the application
CcModificationsWidget	An editor of N-/C-terminal modifications database
CcMultipleDatasetsTableWidget	Aggregated results from multiple datasets
CcPatternSimulatorWidget	The implementation of an isotopic pattern simulator (window)
CcSequenceDatabaseWidget	An editor of sequences database
CcSpectrumDetailWidget	The class representing a widget for visualisation of a detail of a spectrum (opened after doubleclick on a row when results are reported)
CcSummaryPeaksTableWidget	Summary table of matched peaks
►CQMutex
CcCandidateSet	The class representing a set of peptide sequence candidates
CcIsotopePatternCache	Isotope pattern cache (LRU cache is implemented)
►CQObject
CcEventFilter	An event filter
CcSpectrumAnalyzerThreadMS1	The class representing a thread for an initial check of LC-MS and MSI spectra
CcSpectrumComparatorThreadMS1	The class representing a thread for comparison of a theoretical spectrum with a peak list (MS1 level)
CcSpectrumComparatorThreadMS2	The class representing a thread for comparison of a theoretical spectrum with a peak list (MS2 level)
CcSpectrumGeneratorThreadMS1	The class representing a thread for generating a theoretical spectrum (MS1 level)
►CQRunnable
CcSpectrumAnalyzerThreadMS1	The class representing a thread for an initial check of LC-MS and MSI spectra
CcSpectrumComparatorThreadMS1	The class representing a thread for comparison of a theoretical spectrum with a peak list (MS1 level)
CcSpectrumComparatorThreadMS2	The class representing a thread for comparison of a theoretical spectrum with a peak list (MS2 level)
CcSpectrumGeneratorThreadMS1	The class representing a thread for generating a theoretical spectrum (MS1 level)
►CQSortFilterProxyModel
CcBricksDatabaseProxyModel	A proxy model for editor of database of building blocks
CcCalibrationChartProxyModel	A table proxy model
CcMainWindowProxyModel	A table proxy model
CcModificationsProxyModel	A proxy model for editor of database of modifications
CcMultipleDatasetsTableProxyModel	A table proxy model
CcSequenceDatabaseProxyModel	A proxy model for editor of database of sequences
CcSpectrumDetailProxyModel	A table proxy model
CcSummaryPeaksTableProxyModel	A table proxy model
►CQStyledItemDelegate
CcCheckBoxDelegate	A checkbox item delegate
CcComboBoxDelegate	A combobox item delegate
CcHTMLDelegate	A delegate to display rich text
CcMultipleButtonDelegate	A delegate to create multiple buttons
CcViewButtonDelegate	A delegate to create a reference view button
►CQThread
CcFormulaPredictorThread	The thread which searches molecular formulas corresponding to m/z value
CcGraphReaderThread	The class representing a thread which scans the de novo graph for peptide sequence candidates
CcMainThread	The class representing a thread launched by the command 'Search->Run'
►CQWidget
CcAboutWidget	The widget representing the dialog 'About'
CcBranchCyclicWidget	Visualization of a branch-cyclic peptide
CcBranchedWidget	Visualization of a branched peptide
CcCyclicWidget	Visualization of a cyclic peptide
CcDefineCalibrationWidget	The widget for definition of calibration curve
CcDrawPeptideWidget	Draw a peptide from a sequence of building blocks
CcFragmentIonsListWidget	The widget for selection of fragment ion types
CcGraphWidget	The widget representing the dialog 'View->Graph'
CcImageWindowTabElectron	The class representing a tab used to import images from electron microscopy
CcImageWindowTabOptical	The class representing a tab used to import images from light microscopy
CcLinearWidget	Visualization of a linear peptide
CcNeutralLossesListWidget	The widget for selection of types of neutral losses
CcParametersWidget	The class representing a widget for editing parameters of the application
CcPreferencesTabDataProcessing	The class representing a tab used to define the data processing parameters
CcPreferencesTabDirectories	The class representing a tab of default directories
CcPreferencesTabIonTypes	The class representing a tab of ion types
CcPreferencesTabURLs	The class representing a tab of URLs
CcPubChemSearchWidget	The widget representing the PubChem search widget
CsplitSite	The structure representing a splitting site of a cyclic peptide
CTRotationInfo	An auxiliary structure representing a branch permutation of a branched peptide