CycloBranch
cPeaksList Member List

This is the complete list of members for cPeaksList, including all inherited members.

add(cPeak &peak)cPeaksList
attach(cPeaksList &peaklist)cPeaksList
clear()cPeaksList
cPeaksList()cPeaksList
cPeaksList(const cPeaksList &peakslist)cPeaksList
cropAbsoluteIntenzity(unsigned minimumabsoluteintensitythreshold)cPeaksList
cropMaximumMZRatio(double maximummz, double errortolerance)cPeaksList
cropMinimumMZRatio(double minimummz, double errortolerance)cPeaksList
cropRelativeIntenzity(double minimumrelativeintensitythreshold)cPeaksList
equals(cPeaksList &secondpeaklist)cPeaksList
fillOrderIDs()cPeaksList
find(double mzratio, double fragmentmasserrortolerance)cPeaksList
getCoordinateX()cPeaksList
getCoordinateY()cPeaksList
getMaximumAbsoluteIntensity()cPeaksList
getMaximumAbsoluteIntensityFromMZInterval(double minmz, double maxmz, bool hidematched, bool hideunmatched, ePeptideType peptidetype, bool hidescrambled)cPeaksList
getMaximumMZRatio()cPeaksList
getMaximumRelativeIntensity()cPeaksList
getMaximumRelativeIntensityFromMZInterval(double minmz, double maxmz, bool hidematched, bool hideunmatched, ePeptideType peptidetype, bool hidescrambled)cPeaksList
getMinimumMZRatio()cPeaksList
getRetentionTime()cPeaksList
getRetentionTimeUnit()cPeaksList
getTitle()cPeaksList
load(ifstream &is, int fileversionpart1, int fileversionpart2, int fileversionpart3)cPeaksList
loadFromBAFStream(ifstream &stream)cPeaksList
loadFromIBDStream(cImzMLItem &imzmlitem, ifstream &ibdstream, bool use_64bit_float_mz_precision, bool use_64bit_float_intensity_precision)cPeaksList
loadFromMGFStream(ifstream &stream, int timeunit)cPeaksList
loadFromPlainTextStream(ifstream &stream)cPeaksList
markIsotopes()cPeaksList
maxHighestPeaksInWindow(int maximumnumberofpeaksinwindow, double windowsize)cPeaksList
normalizeIntenzity()cPeaksList
normalizeIntenzityByValue(double value)cPeaksList
operator=(const cPeaksList &peakslist)cPeaksList
operator[](int position)cPeaksList
print(bool htmlterminatelines=false, bool printgroupid=false)cPeaksList
reduceIsotopeFormulaDescriptions(unordered_map< string, int > &isotopeformuladesctoid)cPeaksList
reducePeakDescriptions(unordered_map< string, int > &peakdesctoid)cPeaksList
remove(int position)cPeaksList
removeChargeVariants(int maximumcharge, double fragmentmasserrortolerance)cPeaksList
removeIsotopes(int maximumcharge, double fragmentmasserrortolerance, cMainThread *os=0)cPeaksList
removeNeutralLoss(double loss, int maximumcharge, double fragmentmasserrortolerance)cPeaksList
removeObsolete()cPeaksList
resize(int size)cPeaksList
setCoordinates(int x, int y)cPeaksList
setIsotopeFlags(bool value)cPeaksList
setRetentionTime(double rt)cPeaksList
setRetentionTimeUnit(int unit)cPeaksList
setTitle(string &title)cPeaksList
size()cPeaksList
sortbyAbsoluteIntensityDesc()cPeaksList
sortbyGroupId()cPeaksList
sortbyMass(int limit=-1)cPeaksList
sortbyOrderId()cPeaksList
sortbyRelativeIntensityDesc()cPeaksList
store(ofstream &os)cPeaksList
storeToIBDStream(ofstream &ibdstream, bool use_64bit_float_mz_precision, bool use_64bit_float_intensity_precision)cPeaksList