cBranchCyclicWidget.h File Reference

Visualization of a branch-cyclic peptide. More...

#include <math.h>
#include <QWidget>
#include <QPalette>
#include "core/cTheoreticalSpectrum.h"
#include "gui/cLinearWidget.h"
#include "gui/cCyclicWidget.h"

Go to the source code of this file.

Classes
class	cBranchCyclicWidget
	Visualization of a branch-cyclic peptide. More...

Functions
void	generateBranchLabelsDown (bool nterminal, int rotationid, unordered_set< cIonLabel, hash_cIonLabel > &labels, cParameters *parameters, cTheoreticalSpectrum *theoreticalspectrum, int centerx, int topmargin, int horizontalstep, int verticalstep, string visibleionseries, string visibleneutralloss, int visiblerotationid, int branchstart)
	Generate labels of fragment ions on a branch of a branch-cyclic peptide (direction down). More...
void	generateBranchLabelsUp (bool nterminal, int rotationid, unordered_set< cIonLabel, hash_cIonLabel > &labels, cParameters *parameters, cTheoreticalSpectrum *theoreticalspectrum, int centerx, int topmargin, int horizontalstep, int verticalstep, string visibleionseries, string visibleneutralloss, int visiblerotationid, int branchend, int fragmentend)
	Generate labels of fragment ions on a branch of a branch-cyclic peptide (direction up). More...

Detailed Description

Visualization of a branch-cyclic peptide.

Function Documentation

generateBranchLabelsDown()

void generateBranchLabelsDown	(	bool	nterminal,
		int	rotationid,
		unordered_set< cIonLabel, hash_cIonLabel > &	labels,
		cParameters *	parameters,
		cTheoreticalSpectrum *	theoreticalspectrum,
		int	centerx,
		int	topmargin,
		int	horizontalstep,
		int	verticalstep,
		string	visibleionseries,
		string	visibleneutralloss,
		int	visiblerotationid,
		int	branchstart
	)

Generate labels of fragment ions on a branch of a branch-cyclic peptide (direction down).

Parameters

nterminal	if true only nterminal fragment ions are drawn, if false only cterminal fragment ions are drawn
rotationid	id of a sequence rotation
labels	labels of fragment ions
parameters	a pointer to parameters of the application
theoreticalspectrum	a theoretical spectrum
centerx	x coordinate of a center of the ring
topmargin	top margin in pixels
horizontalstep	horizontal step (determine width of blocks)
verticalstep	vertical step (determine height of blocks)
visibleionseries	name of a ion series to be visualized
visibleneutralloss	name of a neutral loss to be visualized
visiblerotationid	id of a rotation whose fragment ions are visualized
branchstart	starting position of a branch

generateBranchLabelsUp()

void generateBranchLabelsUp	(	bool	nterminal,
		int	rotationid,
		unordered_set< cIonLabel, hash_cIonLabel > &	labels,
		cParameters *	parameters,
		cTheoreticalSpectrum *	theoreticalspectrum,
		int	centerx,
		int	topmargin,
		int	horizontalstep,
		int	verticalstep,
		string	visibleionseries,
		string	visibleneutralloss,
		int	visiblerotationid,
		int	branchend,
		int	fragmentend
	)

Generate labels of fragment ions on a branch of a branch-cyclic peptide (direction up).

Parameters

nterminal	if true only nterminal fragment ions are drawn, if false only cterminal fragment ions are drawn
rotationid	id of a sequence rotation
labels	labels of fragment ions
parameters	a pointer to parameters of the application
theoreticalspectrum	a theoretical spectrum
centerx	x coordinate of a center of the ring
topmargin	top margin in pixels
horizontalstep	horizontal step (determine width of blocks)
verticalstep	vertical step (determine height of blocks)
visibleionseries	name of a ion series to be visualized
visibleneutralloss	name of a neutral loss to be visualized
visiblerotationid	id of a rotation whose fragment ions are visualized
branchend	end position of a branch
fragmentend	last fragment to draw