The detailed definitions of all supported fragment ion types. More...

Public Member Functions
	cFragmentIons ()
	The constructor.

	cFragmentIons (bool cyclicnterminus, bool cycliccterminus, string &precursoradduct)
	The constructor. More...

cFragmentIonType &	operator[] (eFragmentIonType iontype)
	Overloaded operator []. More...

void	recalculateFragments (bool cyclicnterminus, bool cycliccterminus, string &precursoradduct)
	Recalculate all fragment ion types. More...

void	store (ofstream &os)
	Store the structure into an output stream. More...

void	load (ifstream &is)
	Load the structure from an input stream. More...

Detailed Description

The detailed definitions of all supported fragment ion types.

Constructor & Destructor Documentation

cFragmentIons::cFragmentIons	(	bool	cyclicnterminus,
		bool	cycliccterminus,
		string &	precursoradduct
	)

The constructor.

Parameters

cyclicnterminus	true when the N-terminus of a linear peptide is cyclized
cycliccterminus	true when the C-terminus of a linear peptide is cyclized
precursoradduct	an adduct of a precursor ion

void cFragmentIons::load ( ifstream & is )

Load the structure from an input stream.

Parameters

is	an input stream

cFragmentIonType & cFragmentIons::operator[] ( eFragmentIonType iontype )

Overloaded operator [].

Parameters

iontype type of fragment ion

Return values

cFragmentIonType reference to a structure with detailed information about the fragment ion

void cFragmentIons::recalculateFragments	(	bool	cyclicnterminus,
		bool	cycliccterminus,
		string &	precursoradduct
	)

Recalculate all fragment ion types.

Parameters

cyclicnterminus	true when the N-terminus of a linear peptide is cyclized
cycliccterminus	true when the C-terminus of a linear peptide is cyclized
precursoradduct	an adduct of a precursor ion

void cFragmentIons::store ( ofstream & os )

Store the structure into an output stream.

Parameters

os	an output stream

The documentation for this class was generated from the following files: