cMzML Class Reference

mzML parser. More...

#include <cMzML.h>

Public Member Functions
	cMzML ()
	The constructor.
	~cMzML ()
	The destructor.
int	parse (string &filename, vector< cPeaksList > &peaklists, int profilespectrumid, eModeType mode, cMainThread *os, bool &terminatecomputation)
	Parse a mzml file. More...
bool	hasProfileSpectra ()
	Check if the file contains profile spectra. More...

Detailed Description

mzML parser.

Member Function Documentation

hasProfileSpectra()

bool cMzML::hasProfileSpectra

(

)

Check if the file contains profile spectra.

Return values

bool	true if the file contains profile spectra

parse()

int cMzML::parse	(	string &	filename,
		vector< cPeaksList > &	peaklists,
		int	profilespectrumid,
		eModeType	mode,
		cMainThread *	os,
		bool &	terminatecomputation
	)

Parse a mzml file.

Parameters

filename	mzml filename
peaklists	mzml filename
profilespectrumid	id of a profile spectrum to be extracted, -1 = extract all profile spectra
mode	program mode
os	pointer to the main thread of the application (output stream)
terminatecomputation	reference to a variable determining that the computation must be stopped

Return values

0	= success; -1 = aborted by user

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The documentation for this class was generated from the following files:

• core/cMzML.h
• core/cMzML.cpp