cDeNovoGraphNode.h File Reference

The representation of a node in the de novo graph. More...

#include <unordered_set>
#include <vector>
#include <map>
#include <fstream>
#include "core/cFragmentIons.h"

Go to the source code of this file.

Classes
struct	nodeEdge
	An auxiliary structure to store relationship between a node and an edge. More...
struct	cEdge
	The structure representing an outgoing edge from a node. More...
struct	hash_cEdge
	The structure defining a hash function of cEdge. More...
class	cDeNovoGraphNode
	The class representing a node in the de novo graph. More...

Functions
bool	operator== (nodeEdge const &a, nodeEdge const &b)
	Overloaded operator ==. More...
bool	operator== (cEdge const &a, cEdge const &b)
	Overloaded operator ==. More...
bool	compareEdgesByPPMError (const cEdge &a, const cEdge &b)
	Compare edges by ppm error. More...
bool	compareEdgesByTargetNodeIntensityDesc (const cEdge &a, const cEdge &b)
	Compare edges by target node intensity. More...

Detailed Description

The representation of a node in the de novo graph.

Function Documentation

compareEdgesByPPMError()

bool compareEdgesByPPMError	(	const cEdge &	a,
		const cEdge &	b
	)

Compare edges by ppm error.

Parameters

a	first edge
b	second edge

Return values

bool	true when a has smaller ppm error than b

compareEdgesByTargetNodeIntensityDesc()

bool compareEdgesByTargetNodeIntensityDesc	(	const cEdge &	a,
		const cEdge &	b
	)

Compare edges by target node intensity.

Parameters

a	first edge
b	second edge

Return values

bool	true when the target node of a has bigger intensity than the target node of b

operator==() [1/2]

bool operator==	(	cEdge const &	a,
		cEdge const &	b
	)

Overloaded operator ==.

Parameters

a	first edge
b	second edge

Return values

bool	true when edges are equal

operator==() [2/2]

bool operator==	(	nodeEdge const &	a,
		nodeEdge const &	b
	)

Overloaded operator ==.

Parameters

a	first nodeEdge
b	second nodeEdge

Return values

bool	true when nodeEdges are equal