core Directory Reference

Files
file	cBrick.h [code]
	The representation of a brick.
file	cBricksDatabase.h [code]
	The database of building blocks.
file	cCandidate.h [code]
	The representation of a peptide sequence candidate.
file	cCandidateSet.h [code]
	The representation of a set of peptide sequence candidates.
file	cDeNovoGraph.h [code]
	The implementation of the de novo graph.
file	cDeNovoGraphNode.h [code]
	The representation of a node in the de novo graph.
file	cFragmentIons.h [code]
	Basic definitions of fragment ions occurring in the mass spectra.
file	cGlobalPreferences.h [code]
	The representation of a set of peptide sequence candidates.
file	cImzML.h [code]
	imzML parser.
file	cIsotopePatternCache.h [code]
	Isotope pattern cache (LRU cache is implemented).
file	cMzML.h [code]
	mzML parser.
file	cParameters.h [code]
	Definitions of program parameters.
file	cPeak.h [code]
	The representation of a peak in a mass spectrum.
file	cPeakListSeries.h [code]
	The representation of a series of peaklists.
file	cPeaksList.h [code]
	The representation of a peak list.
file	cSequence.h [code]
	The representation of a sequence.
file	cSequenceDatabase.h [code]
	The database of sequences.
file	cSummaryFormula.h [code]
	The representation of a summary formula.
file	cTheoreticalSpectrum.h [code]
	The representation of a theoretical mass spectrum.
file	cTheoreticalSpectrumList.h [code]
	The representation of lists of theoretical spectra.
file	utilities.h [code]
	Auxiliary funtions and structures.