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CycloBranch
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The thread for comparison of a theoretical spectrum with a peak list (MS2 level). More...
Go to the source code of this file.
Classes | |
| class | cSpectrumComparatorThreadMS2 |
| The class representing a thread for comparison of a theoretical spectrum with a peak list (MS2 level). More... | |
Functions | |
| bool | comparePaths (vector< nodeEdge > &a, vector< nodeEdge > &b) |
| Compare two paths of a peptide sequence candidate as a string. More... | |
| bool | compareBandAllIonsDesc (const cTheoreticalSpectrum &a, const cTheoreticalSpectrum &b) |
| Compare scores of two theoretical spectra (number of b-ions and all ions secondly). More... | |
| bool | compareYBandAllIonsDesc (const cTheoreticalSpectrum &a, const cTheoreticalSpectrum &b) |
| Compare scores of two theoretical spectra (number of b-ions + y-ions and all ions as a secondary score). More... | |
| bool | compareYandAllIonsDesc (const cTheoreticalSpectrum &a, const cTheoreticalSpectrum &b) |
| Compare scores of two theoretical spectra (number of y-ions and all ions as a secondary score). More... | |
| bool | compareSumOfRelIntDesc (const cTheoreticalSpectrum &a, const cTheoreticalSpectrum &b) |
| Compare scores of two theoretical spectra (sum of relative intensities of matched peaks). More... | |
| bool | compareNumberOfMatchedPeaksDesc (const cTheoreticalSpectrum &a, const cTheoreticalSpectrum &b) |
| Compare scores of two theoretical spectra (number of matched peaks). More... | |
| bool | compareWeightedRatioDesc (const cTheoreticalSpectrum &a, const cTheoreticalSpectrum &b) |
| Compare scores of two theoretical spectra (weighted ratio of matched peaks). More... | |
| bool | compareCosineSimilarityDesc (const cTheoreticalSpectrum &a, const cTheoreticalSpectrum &b) |
| Compare scores of two theoretical spectra (cosine similarity). More... | |
The thread for comparison of a theoretical spectrum with a peak list (MS2 level).
| bool compareBandAllIonsDesc | ( | const cTheoreticalSpectrum & | a, |
| const cTheoreticalSpectrum & | b | ||
| ) |
Compare scores of two theoretical spectra (number of b-ions and all ions secondly).
| a | first theoretical spectrum |
| b | second theoretical spectrum |
| bool | true if the score of a is greater than the score of b |
| bool compareCosineSimilarityDesc | ( | const cTheoreticalSpectrum & | a, |
| const cTheoreticalSpectrum & | b | ||
| ) |
Compare scores of two theoretical spectra (cosine similarity).
| a | first theoretical spectrum |
| b | second theoretical spectrum |
| bool | true if the score of a is greater than the score of b |
| bool compareNumberOfMatchedPeaksDesc | ( | const cTheoreticalSpectrum & | a, |
| const cTheoreticalSpectrum & | b | ||
| ) |
Compare scores of two theoretical spectra (number of matched peaks).
| a | first theoretical spectrum |
| b | second theoretical spectrum |
| bool | true if the score of a is greater than the score of b |
Compare two paths of a peptide sequence candidate as a string.
| a | first theoretical spectrum |
| b | second theoretical spectrum |
| bool | true if the path of a is smaller than the path of b |
| bool compareSumOfRelIntDesc | ( | const cTheoreticalSpectrum & | a, |
| const cTheoreticalSpectrum & | b | ||
| ) |
Compare scores of two theoretical spectra (sum of relative intensities of matched peaks).
| a | first theoretical spectrum |
| b | second theoretical spectrum |
| bool | true if the score of a is greater than the score of b |
| bool compareWeightedRatioDesc | ( | const cTheoreticalSpectrum & | a, |
| const cTheoreticalSpectrum & | b | ||
| ) |
Compare scores of two theoretical spectra (weighted ratio of matched peaks).
| a | first theoretical spectrum |
| b | second theoretical spectrum |
| bool | true if the score of a is greater than the score of b |
| bool compareYandAllIonsDesc | ( | const cTheoreticalSpectrum & | a, |
| const cTheoreticalSpectrum & | b | ||
| ) |
Compare scores of two theoretical spectra (number of y-ions and all ions as a secondary score).
| a | first theoretical spectrum |
| b | second theoretical spectrum |
| bool | true if the score of a is greater than the score of b |
| bool compareYBandAllIonsDesc | ( | const cTheoreticalSpectrum & | a, |
| const cTheoreticalSpectrum & | b | ||
| ) |
Compare scores of two theoretical spectra (number of b-ions + y-ions and all ions as a secondary score).
| a | first theoretical spectrum |
| b | second theoretical spectrum |
| bool | true if the score of a is greater than the score of b |