cDeNovoGraph.h File Reference

The implementation of the de novo graph. More...

#include <iostream>
#include <fstream>
#include <vector>
#include <string>
#include "core/cParameters.h"
#include "core/cDeNovoGraphNode.h"
#include "core/cPeakListSeries.h"
#include "core/cBricksDatabase.h"
#include "core/cTheoreticalSpectrumList.h"
#include "parallel/cGraphReaderThread.h"

Go to the source code of this file.

Classes
class	cDeNovoGraph
	The class implementing the de novo graph. More...

Functions
bool	compareNodes (cDeNovoGraphNode &node1, cDeNovoGraphNode &node2)
	Compare two nodes. More...

Variables
const long long unsigned	maximumcandidates = 1000000000
	Maximum number of candidates to be read from the graph.

Detailed Description

The implementation of the de novo graph.

Function Documentation

compareNodes()

bool compareNodes	(	cDeNovoGraphNode &	node1,
		cDeNovoGraphNode &	node2
	)

Compare two nodes.

Parameters

node1	reference to the first node
node2	reference to the second node

Return values

bool	true when the mz ratio of the first node is smaller than the mz ratio of the second node