- s -
- saveSettings() : cGlobalPreferences
- sendFilterOptionsToChromatogram() : cSummaryPeaksTableWidget
- sendFilterOptionsToImageWindow() : cSummaryPeaksTableWidget
- sendInsert() : cDrawPeptideWidget
- sendParameters() : cMainThread
- sendSequence() : cDrawPeptideWidget
- sendSequenceLine() : cParametersWidget
- sendTag() : cDrawPeptideWidget
- setAbsoluteIntensityEnabled() : cChromatogramWindow, cSpectrumDetailWidget
- setAcronymPeptideNameWithHTMLReferences() : cCandidate
- setAcronyms() : cBrick, cCandidate
- setAndRestoreParameters() : cParametersWidget
- setArtificial() : cBrick
- setBackboneAcronyms() : cCandidate
- setBranchAcronyms() : cCandidate
- setBranchModification() : cSequence
- setCandidate() : cCandidate, cTheoreticalSpectrum
- setComposition() : cBrick
- setCoordinates() : cPeaksList
- setCorrelationValues() : cImageWindowWidget
- setCTterminalModification() : cSequence
- setData() : cCalibrationChart, cCalibrationChartScene
- setDecoy() : cSequence
- setDefaultDataProcessingMethods() : cGlobalPreferences
- setDefaultDirectories() : cGlobalPreferences
- setDefaultIonTypes() : cGlobalPreferences
- setDefaultMaxXY() : cImageWindowWidget
- setDefaultURLs() : cGlobalPreferences
- setDefaultValues() : cImageWindow
- setEditorData() : cComboBoxDelegate
- setEICChromatogram() : cChromatogramWindowWidget
- setEndModifID() : cCandidate
- setExperimentalSpectrum() : cTheoreticalSpectrum
- setFDRs() : cTheoreticalSpectrum
- setFilterOptions() : cImageWindowWidget
- setFlags() : cSpectrumDetailProxyModel
- setFormula() : cSummaryFormula
- setFormValues() : cImageWindowImportDialog, cImageWindowTabElectron, cImageWindowTabOptical
- setFromMap() : cSummaryFormula
- setGraph() : cMainThread
- setGraphReaderIsWorking() : cMainThread
- setGraphType() : cCalibrationChartScene
- setHCON() : cParametersWidget
- setHideMatchedPeaksEnabled() : cSpectrumDetailWidget
- setHidePeakLabelsEnabled() : cSpectrumDetailWidget
- setHideScrambledPeaksEnabled() : cSpectrumDetailWidget
- setHideUnmatchedPeaksEnabled() : cSpectrumDetailWidget
- setHistologyImage() : cImageWindowWidget
- setHistologyPosition() : cImageWindowWidget
- setHTML() : cGraphWidget, cPubChemSearchWidget
- setIntensity() : cDeNovoGraphNode
- setIsotopeFlags() : cPeaksList
- setKeepAspectRatio() : cImageWindowWidget
- setLineParameters() : cCalibrationChart, cCalibrationChartScene
- setLosses() : cBrick
- setLossIDs() : cBrick
- setMass() : cBrick
- setMicroscopyImage() : cImageWindowWidget
- setMicroscopyPosition() : cImageWindowWidget
- setMiddleModifID() : cCandidate
- setModelData() : cComboBoxDelegate
- setMouseMzSelectionEnabled() : cSpectrumDetailWidget
- setMZRatio() : cDeNovoGraphNode
- setName() : cBrick, cCandidate, cSequence
- setNavigationLayer() : cImageWindowWidget
- setNTterminalModification() : cSequence
- setNumberOfCompletedSeries() : cTheoreticalSpectrum
- setOpticalImage() : cImageWindowWidget
- setOutputStream() : cParameters
- setParameters() : cTheoreticalSpectrum
- setPartial() : cSummaryFormula
- setPath() : cCandidate
- setPathId() : cTheoreticalSpectrum
- setPeakShape() : cChromatogramWindow
- setPeptideType() : cSequence
- setPreferences() : cPreferencesDialog, cPreferencesTabDataProcessing, cPreferencesTabDirectories, cPreferencesTabIonTypes, cPreferencesTabURLs
- setProfileSpectrumEnabled() : cSpectrumDetailWidget
- setRealPeptideName() : cCandidate
- setReference() : cSequence
- setReferences() : cBrick
- setRegion() : cSummaryPeaksTableProxyModel
- setReportIsomers() : cBranchCyclicWidget, cBranchedWidget, cCyclicWidget, cLinearWidget
- setResidueLossType() : cBrick
- setRetentionTime() : cPeaksList, cSequence
- setRetentionTimeUnit() : cPeaksList
- setSelectedRegion() : cImageWindowWidget
- setSequence() : cDrawPeptideWidget, cParametersWidget, cSequence
- setStartIonType() : cCandidate
- setStartModifID() : cCandidate
- setSummary() : cBrick
- setSummaryFormula() : cCandidate, cSequence
- setTag() : cParametersWidget
- setTitle() : cPeaksList
- setValidSequence() : cTheoreticalSpectrum
- setValues() : cPreferencesIonTypeDialog
- setWholeWord() : cBricksDatabaseProxyModel, cMainWindowProxyModel, cModificationsProxyModel, cSequenceDatabaseProxyModel, cSummaryPeaksTableProxyModel
- showEvent() : cCalibrationChartScene, cChromatogramWindowWidget, cPatternSimulatorSceneWidget, cSpectrumSceneWidget
- size() : cBricksDatabase, cCandidateSet, cDeNovoGraphNode, cPeakListSeries, cPeaksList, cSequenceDatabase, cTheoreticalSpectrumList
- sortAndFitSize() : cTheoreticalSpectrumList
- sortbyAbsoluteIntensityDesc() : cPeaksList
- sortbyGroupId() : cPeaksList
- sortbyMass() : cBricksDatabase, cPeaksList
- sortByMass() : cTheoreticalSpectrum
- sortbyOrderId() : cPeaksList
- sortbyRelativeIntensityDesc() : cPeaksList
- sortEdgesByPPMError() : cDeNovoGraph, cDeNovoGraphNode
- sortEdgesByTargetNodeIntensity() : cDeNovoGraph, cDeNovoGraphNode
- startGraphReader() : cDeNovoGraph
- startsWithBracket() : TRotationInfo
- stopComputation() : cMainWindow
- store() : cBrick, cBricksDatabase, cCandidate, cDefineCalibrationWidget, cFragmentIons, cFragmentIonType, cGraphWidget, cIonType, cParameters, cPeak, cPeakListSeries, cPeaksList, cPubChemSearchWidget, cSequence, cSequenceDatabase, cSummaryFormula, cTheoreticalSpectrum, matchedSeries, neutralLoss, nodeEdge
- storeToIBDStream() : cPeaksList
- storeToPlainTextStream() : cBricksDatabase, cSequenceDatabase
- summaryPeaksTableRowDoubleClicked() : cSummaryPeaksTableWidget